Difference between revisions of "Data Processing at SACLA"
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| + | == Headline text == | ||
1) AgBeh (silver behenate). Determine detector distance and beam center | 1) AgBeh (silver behenate). Determine detector distance and beam center | ||
| + | --> update SACLA-provided *.geom file (CrystFEL format) | ||
| + | --> run sacla geom to json on *.geom to get equivalent for DIALS processing | ||
| + | |||
| + | |||
| + | == DIALS workflow == | ||
| + | dials.import file.h5 (the h5 will have 1000's of images in it) | ||
| + | --> datablock.json. Has experimental models as abstracted from image header | ||
| + | |||
| + | dials.find_spots datablock.json | ||
| + | --> strong.pickle | ||
| + | |||
| + | dials.index strong.pickle datablock.json | ||
| + | --> indexed.pickle experiments.json | ||
| + | |||
| + | == Aggregate processing at XFELS == | ||
| + | dials.stills_process (substitutes for the individual steps) | ||
Revision as of 22:17, 17 November 2017
Headline text
1) AgBeh (silver behenate). Determine detector distance and beam center --> update SACLA-provided *.geom file (CrystFEL format) --> run sacla geom to json on *.geom to get equivalent for DIALS processing
DIALS workflow
dials.import file.h5 (the h5 will have 1000's of images in it) --> datablock.json. Has experimental models as abstracted from image header
dials.find_spots datablock.json --> strong.pickle
dials.index strong.pickle datablock.json --> indexed.pickle experiments.json
Aggregate processing at XFELS
dials.stills_process (substitutes for the individual steps)
