Ha14 Tutorials
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These tutorials assumes the steps outlined in setup have been followed first. Processing xfel data at LCLS consists of four steps:
- Preparatory steps
- Metrology refinement
- Indexing and integration. Optional steps:
- Real-time progress monitoring.
- Configuring specific spotfinder, indexing and integration parameters using phil.
- Merging
- Advanced Merging: Use cases for isomorphous replacement and de novo structure
- Resolving an Indexing Ambiguity
Additionally, cctbx.xfel utilizes phil files to manage its configuration settings.
Processing L498 thermolysin details instructions to reproduce the results published in the forthcoming cctbx.xfel paper.