http://viper.lbl.gov:8080/cctbx.xfel/index.php?action=history&feed=atom&title=Gd-Lysozyme-t003.phil 2026-04-30T15:28:09Z Revision history for this page on the wiki MediaWiki 1.39.15 http://viper.lbl.gov:8080/cctbx.xfel/index.php?title=Gd-Lysozyme-t003.phil&diff=754&oldid=prev 2014-09-24T18:53:36Z

<p>Created page with &quot;&lt;pre&gt; # -*- mode: conf -*- distl { detector_tiling = None peripheral_margin = 1 quad_translations =2 -6 4 -6 -6 1 0 -4 tile_translations = &quot;&quot;&quot; 0, 0, 0, 0, 0,...&quot;</p> <p><b>New page</b></p><div>&lt;pre&gt;<br /> # -*- mode: conf -*-<br /> <br /> distl {<br /> detector_tiling = None<br /> peripheral_margin = 1<br /> quad_translations =2 -6 4 -6 -6 1 0 -4<br /> tile_translations = &quot;&quot;&quot;<br /> 0, 0, 0, 0, 0, 0, 0, 0, <br /> 0, 0, 0, 0, 0, 0, 0, 0, <br /> 0, 0, 0, 0, 0, 0, 0, 0, <br /> 0, 0, 0, 0, 0, 0, 0, 0, <br /> <br /> 0, 0, 0, 0, 0, 0, 0, 0, <br /> 0, 0, 0, 0, 0, 0, 0, 0,<br /> 0, 0, 0, 0, 0, 0, 0, 0, <br /> 0, 0, 0, 0, 0, 0, 0, 0, <br /> <br /> 0, 0, 0, 0, 0, 0, 0, 0,<br /> 0, 0, 0, 0, 0, 0, 0, 0, <br /> 0, 0, 0, 0, 0, 0, 0, 0,<br /> 0, 0, 0, 0, 0, 0, 0, 0, <br /> <br /> 0, 0, 0, 0, 0, 0, 0, 0, <br /> 0, 0, 0, 0, 0, 0, 0, 0, <br /> 0, 0, 0, 0, 0, 0, 0, 0, <br /> 0, 0, 0, 0, 0, 0, 0, 0 &quot;&quot;&quot;<br /> } <br /> <br /> <br /> <br /> <br /> <br /> # This is from 4ET8.<br /> target_cell = 79 79 38 90 90 90<br /> known_setting = 9<br /> <br /> distl_highres_limit = 1.9<br /> force_method2_resolution_limit = 1.9<br /> <br /> mosaicity_limit = 1<br /> <br /> # Set to True to pick up second lattice, if present.<br /> #indexing.outlier_detection.switch = True<br /> <br /> distl {<br /> res.outer = 1.9<br /> minimum_signal_height = 5<br /> minimum_spot_height = 10<br /> minimum_spot_area = 1<br /> spot_area_maximum_factor = 20<br /> compactness_filter = False<br /> method2_cutoff_percentage = 5<br /> <br /> # Avoids intensity filter.<br /> peak_intensity_maximum_factor = 10000<br /> }<br /> <br /> indexing {<br /> # Set to True to generate correction vectors.<br /> verbose_cv = True<br /> }<br /> <br /> integration {<br /> mask_pixel_value=-2<br /> background_factor = 2<br /> detector_gain = 1.0<br /> <br /> #model = use_case_3_simulated_annealing_7<br /> model = user_supplied<br /> <br /> signal_penetration = 0.5<br /> #spot_shape_verbose = True<br /> spotfinder_subset = spots_non-ice<br /> mosaic {<br /> refinement_target=ML<br /> kludge1=1.0 #normally 1.0, but sometimes set to 2.0 to increase indexing<br /> domain_size_lower_limit=10.<br /> }<br /> <br /> }<br /> &lt;/pre&gt;</div>

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