http://viper.lbl.gov:8080/cctbx.xfel/index.php?action=history&feed=atom&title=Cxi02416-lyso-t002.phil 2026-05-04T08:01:48Z Revision history for this page on the wiki MediaWiki 1.39.15 http://viper.lbl.gov:8080/cctbx.xfel/index.php?title=Cxi02416-lyso-t002.phil&diff=1105&oldid=prev 2016-03-22T01:24:40Z

<p>Created page with &quot;&lt;pre&gt; input { address=CxiDs2.0:Cspad.0 } dispatch.reindex_strong=True format { file_format=cbf cbf { detz_offset=568 common_mode.algorithm=custom common_mode...&quot;</p> <p><b>New page</b></p><div>&lt;pre&gt;<br /> input {<br /> address=CxiDs2.0:Cspad.0<br /> }<br /> dispatch.reindex_strong=True<br /> format {<br /> file_format=cbf<br /> cbf {<br /> detz_offset=568<br /> common_mode.algorithm=custom<br /> common_mode.custom_parameterization=5,50<br /> }<br /> }<br /> border_mask {<br /> border=1<br /> }<br /> spotfinder {<br /> filter.min_spot_size=2<br /> threshold.xds.gain=25<br /> threshold.xds.global_threshold=100<br /> write_hot_mask=False<br /> }<br /> indexing {<br /> known_symmetry {<br /> space_group = P43212<br /> unit_cell = 78.9 78.9 38.1 90 90 90<br /> }<br /> method=real_space_grid_search<br /> refinement_protocol.n_macro_cycles = 1<br /> refinement_protocol.d_min_start=1.7<br /> }<br /> integration {<br /> integrator=stills<br /> profile.fitting=False<br /> background {<br /> algorithm = simple<br /> simple {<br /> model.algorithm = linear2d<br /> outlier.algorithm = mosflm<br /> }<br /> }<br /> }<br /> refinement {<br /> parameterisation {<br /> beam.fix=all<br /> detector.fix_list=3, # fix detector rotz, allow distance to refine<br /> detector.hierarchy_level=0<br /> auto_reduction {<br /> action=fix<br /> min_nref_per_parameter=1<br /> }<br /> crystal {<br /> unit_cell {<br /> restraints {<br /> tie_to_target {<br /> values=78.9,78.9,38.1,90,90,90<br /> sigmas=1,1,1,0,0,0<br /> apply_to_all=True<br /> }<br /> }<br /> }<br /> }<br /> }<br /> reflections {<br /> outlier.algorithm=null<br /> weighting_strategy.override=stills<br /> weighting_strategy.delpsi_constant=1000000<br /> }<br /> }<br /> profile {<br /> gaussian_rs {<br /> min_spots.overall = 0<br /> }<br /> }<br /> &lt;/pre&gt;</div>

Aaron