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	<id>http://viper.lbl.gov:8080/cctbx.xfel/index.php?action=history&amp;feed=atom&amp;title=Cxi02416-lyso-t000.phil</id>
	<title>Cxi02416-lyso-t000.phil - Revision history</title>
	<link rel="self" type="application/atom+xml" href="http://viper.lbl.gov:8080/cctbx.xfel/index.php?action=history&amp;feed=atom&amp;title=Cxi02416-lyso-t000.phil"/>
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	<updated>2026-06-24T10:55:11Z</updated>
	<subtitle>Revision history for this page on the wiki</subtitle>
	<generator>MediaWiki 1.39.15</generator>
	<entry>
		<id>http://viper.lbl.gov:8080/cctbx.xfel/index.php?title=Cxi02416-lyso-t000.phil&amp;diff=1187&amp;oldid=prev</id>
		<title>Aaron at 16:50, 12 May 2016</title>
		<link rel="alternate" type="text/html" href="http://viper.lbl.gov:8080/cctbx.xfel/index.php?title=Cxi02416-lyso-t000.phil&amp;diff=1187&amp;oldid=prev"/>
		<updated>2016-05-12T16:50:21Z</updated>

		<summary type="html">&lt;p&gt;&lt;/p&gt;
&lt;table style=&quot;background-color: #fff; color: #202122;&quot; data-mw=&quot;interface&quot;&gt;
				&lt;col class=&quot;diff-marker&quot; /&gt;
				&lt;col class=&quot;diff-content&quot; /&gt;
				&lt;col class=&quot;diff-marker&quot; /&gt;
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				&lt;tr class=&quot;diff-title&quot; lang=&quot;en&quot;&gt;
				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;← Older revision&lt;/td&gt;
				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;Revision as of 16:50, 12 May 2016&lt;/td&gt;
				&lt;/tr&gt;&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot; id=&quot;mw-diff-left-l1&quot;&gt;Line 1:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 1:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-side-deleted&quot;&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;&amp;lt;pre&gt;&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;dispatch.integrate=False&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;dispatch.integrate=False&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;input {&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;input {&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot; id=&quot;mw-diff-left-l71&quot;&gt;Line 71:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 72:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;   }&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;   }&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;}&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;}&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-side-deleted&quot;&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;&amp;lt;/pre&gt;&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;/table&gt;</summary>
		<author><name>Aaron</name></author>
	</entry>
	<entry>
		<id>http://viper.lbl.gov:8080/cctbx.xfel/index.php?title=Cxi02416-lyso-t000.phil&amp;diff=1186&amp;oldid=prev</id>
		<title>Aaron: Created page with &quot;dispatch.integrate=False input {   address=CxiDs2.0:Cspad.0 } format {   file_format=cbf   cbf {     detz_offset=568     common_mode.algorithm=custom     common_mode.custom_pa...&quot;</title>
		<link rel="alternate" type="text/html" href="http://viper.lbl.gov:8080/cctbx.xfel/index.php?title=Cxi02416-lyso-t000.phil&amp;diff=1186&amp;oldid=prev"/>
		<updated>2016-05-12T16:49:57Z</updated>

		<summary type="html">&lt;p&gt;Created page with &amp;quot;dispatch.integrate=False input {   address=CxiDs2.0:Cspad.0 } format {   file_format=cbf   cbf {     detz_offset=568     common_mode.algorithm=custom     common_mode.custom_pa...&amp;quot;&lt;/p&gt;
&lt;p&gt;&lt;b&gt;New page&lt;/b&gt;&lt;/p&gt;&lt;div&gt;dispatch.integrate=False&lt;br /&gt;
input {&lt;br /&gt;
  address=CxiDs2.0:Cspad.0&lt;br /&gt;
}&lt;br /&gt;
format {&lt;br /&gt;
  file_format=cbf&lt;br /&gt;
  cbf {&lt;br /&gt;
    detz_offset=568&lt;br /&gt;
    common_mode.algorithm=custom&lt;br /&gt;
    common_mode.custom_parameterization=5,50&lt;br /&gt;
  }&lt;br /&gt;
}&lt;br /&gt;
border_mask {&lt;br /&gt;
  border=1&lt;br /&gt;
}&lt;br /&gt;
spotfinder {&lt;br /&gt;
  filter.min_spot_size=2&lt;br /&gt;
  threshold.xds.gain=25&lt;br /&gt;
  threshold.xds.global_threshold=100&lt;br /&gt;
}&lt;br /&gt;
indexing {&lt;br /&gt;
  known_symmetry {&lt;br /&gt;
    space_group = P43212&lt;br /&gt;
    unit_cell = 78.9 78.9 38.1 90 90 90&lt;br /&gt;
  }&lt;br /&gt;
  method=real_space_grid_search&lt;br /&gt;
  refinement_protocol.n_macro_cycles = 1&lt;br /&gt;
  refinement_protocol.d_min_start=1.7&lt;br /&gt;
}&lt;br /&gt;
integration {&lt;br /&gt;
  integrator=stills&lt;br /&gt;
  profile.fitting=False&lt;br /&gt;
  background {&lt;br /&gt;
    algorithm = simple&lt;br /&gt;
    simple {&lt;br /&gt;
      model.algorithm = linear2d&lt;br /&gt;
      outlier.algorithm = mosflm&lt;br /&gt;
    }&lt;br /&gt;
  }&lt;br /&gt;
}&lt;br /&gt;
refinement {&lt;br /&gt;
  parameterisation {&lt;br /&gt;
    beam.fix=all&lt;br /&gt;
    detector.fix_list=Tau1 # fix detector rotz&lt;br /&gt;
    #detector.fix_list=Dist,Tau1 # fix detector rotz and distance&lt;br /&gt;
    detector.hierarchy_level=0&lt;br /&gt;
    auto_reduction {&lt;br /&gt;
      action=fix&lt;br /&gt;
      min_nref_per_parameter=1&lt;br /&gt;
    }&lt;br /&gt;
    crystal {&lt;br /&gt;
      unit_cell {&lt;br /&gt;
	restraints {&lt;br /&gt;
	  tie_to_target {&lt;br /&gt;
            values=78.9,78.9,38.1,90,90,90&lt;br /&gt;
            sigmas=1,1,1,0,0,0&lt;br /&gt;
            apply_to_all=True&lt;br /&gt;
          }&lt;br /&gt;
	}&lt;br /&gt;
      }&lt;br /&gt;
    }&lt;br /&gt;
  }&lt;br /&gt;
  reflections {&lt;br /&gt;
    outlier.algorithm=null&lt;br /&gt;
    weighting_strategy.override=stills&lt;br /&gt;
  }&lt;br /&gt;
}&lt;br /&gt;
profile {&lt;br /&gt;
  gaussian_rs {&lt;br /&gt;
    min_spots.overall = 0&lt;br /&gt;
  }&lt;br /&gt;
}&lt;/div&gt;</summary>
		<author><name>Aaron</name></author>
	</entry>
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