Cxi02416-lyso-t000.phil

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dispatch.integrate=False input {

 address=CxiDs2.0:Cspad.0

} format {

 file_format=cbf
 cbf {
   detz_offset=568
   common_mode.algorithm=custom
   common_mode.custom_parameterization=5,50
 }

} border_mask {

 border=1

} spotfinder {

 filter.min_spot_size=2
 threshold.xds.gain=25
 threshold.xds.global_threshold=100

} indexing {

 known_symmetry {
   space_group = P43212
   unit_cell = 78.9 78.9 38.1 90 90 90
 }
 method=real_space_grid_search
 refinement_protocol.n_macro_cycles = 1
 refinement_protocol.d_min_start=1.7

} integration {

 integrator=stills
 profile.fitting=False
 background {
   algorithm = simple
   simple {
     model.algorithm = linear2d
     outlier.algorithm = mosflm
   }
 }

} refinement {

 parameterisation {
   beam.fix=all
   detector.fix_list=Tau1 # fix detector rotz
   #detector.fix_list=Dist,Tau1 # fix detector rotz and distance
   detector.hierarchy_level=0
   auto_reduction {
     action=fix
     min_nref_per_parameter=1
   }
   crystal {
     unit_cell {

restraints { tie_to_target {

           values=78.9,78.9,38.1,90,90,90
           sigmas=1,1,1,0,0,0
           apply_to_all=True
         }

}

     }
   }
 }
 reflections {
   outlier.algorithm=null
   weighting_strategy.override=stills
 }

} profile {

 gaussian_rs {
   min_spots.overall = 0
 }

}